Digital drawing board: Round 2

Steven commented on my previous post and said he liked the heatmap option! In my R script I played around with row clustering and color schemes. There are three decisions that need to be made:

1. All data vs. differentially expressed subset
2. Row clustering vs. no row clustering
3. Color schemes

Decision 1: All data vs. differentially expressed subset

Figure 1. All data, now row clustering, standard color scheme

Figure 2. Subset, no row clustering, standard color scheme

Decision 2: Row clustering vs. no row clustering

Figure 3. All data, row clustering, standard color scheme

Figure 4. Subset, row clustering, standard color scheme

Decision 3: Color schemes

Blues

Purples

Purple-Blue

Grey

Purple-Green